Choose a gene to sequence


Geneticists make comparisons between and within species by using specific genes from specific places in the genome. How do you choose which gene to sequence?

Most evolutionary trees are constructed using data from mitochondrial DNA. Why?

Mitochondrial DNA

  • What makes mitochondrial DNA better than nuclear DNA for looking at evolutionary relationships?
  • There are lots of mitochondria in each cell but only one nucleus. So one cell can provide many copies of mtDNA, but only one of nuclear DNA.
  • Mitochondrial DNA has a higher rate of substitution (mutations where one nucleotide is replaced with another) than nuclear DNA, making it easier to find differences between closely related individuals.
  • Mitochondrial DNA is inherited only from the mother, which allows scientists to trace a direct genetic line through mothers.
  • In nuclear DNA, chromosomes recombine during meiosis, resulting in a garbled genetic history. Mitochondrial DNA does not recombine.

Within the mitochondrial DNA, geneticists chose specific genes to sequence, such as cytochrome b, 12S, 16S, and d-loop.

Mitochondrial DNA is not the only part of the genome that gets sequenced. Often scientists use DNA from nuclear genes in addition to mitochondrial genes.

Once geneticists have the right gene chosen, how do they sequence the DNA?